Peptide Database

Peptide NameStructure and allostery in Toll-Spatzle recognition

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length107 amino acids

Chemical FormulaC521H605N145O58S7

DescriptionPDB structure; X-ray @2.35Å

        GVGGSDERFLCRSIRKLVYPKKGLRADDTWQLIVNNDEYKQAIQIEECEGADQPCDFAANFPQSYNPICKQHYTQQTLASIKSDGELDVVQNSFKIPSCCKCALKTG
    

Molecular Weight11978.40 Da

Isoelectric Point (pI)5.64

Net Charge (pH 7.0)-1.34

Net Charge (pH 7.4) -1.97

Charge Density (pH 7.0) -0.0125

GRAVY Index-0.55

Hydrophobic Moment 0.12

Boman Index-0.09

Instability Index36.66

Aliphatic Index 71.12

Aromaticity 0.0935

Extinction Coeff. Reduced 11460.00

Extinction Coeff. Oxidized 11835.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 4224.08

LogP 7.62

H-bond Donors 81.0

H-bond Acceptors 172.0

Rotatable Bonds 212.0

Heavy Atoms 743.0

Ring Count 16.0

Amide Bonds 215.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0431225 VERIFIED: YES

Provenance & Taxonomy

OrganismDROSOPHILA MELANOGASTER [other]

Tax ID7227

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

N-TermNone

C-TermNone

Bio-Activity Profile

Function

Antimicrobial

MethodX-ray