Peptide Database

Peptide NameSynaptotagmin-2

Function Ontology

Binding / Molecular interaction

Binding / Molecular interaction ▸ Calcium binding

Binding / Molecular interaction ▸ Metal binding

Standard StatusStandard

Sequence Length422 amino acids

Chemical FormulaC2106H2524N556O206S23

DescriptionStandard

        MRNIFKRNQEPNVAPATTTATMPLAPVAPADNSTESTGPGESQEDMFAKLKEKFFNEINKIPLPPWALIAMAVVAGLLLLTCCFCICKKCCCKKKKNKKEKGKGMKNAMNMKDMKGGQDDDDAETGLTEGEGEGEEEKEPENLGKLQFSLDYDFQANQLTVGVLQAAELPALDMGGTSDPYVKVFLLPDKKKKYETKVHRKTLNPAFNETFTFKVPYQELAGKTLVMAIYDFDRFSKHDIIGEVKVPMNTVDLGQPIEEWRDLQGGEKEEPEKLGDICTSLRYVPTAGKLTVCILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTVKKKTLNPYFNESFSFEIPFEQIQKVQVVVTVLDYDKLGKNEAIGKIFVGSNATGTELRHWSDMLANPRRPIAQWHSLKPEEEVDALLGKNK
    

Molecular Weight47262.11 Da

Isoelectric Point (pI)7.86

Net Charge (pH 7.0)2.95

Net Charge (pH 7.4) 1.88

Charge Density (pH 7.0) 0.0070

GRAVY Index-0.52

Hydrophobic Moment 0.05

Boman Index-0.05

Instability Index36.18

Aliphatic Index 76.02

Aromaticity 0.0853

Extinction Coeff. Reduced 35410.00

Extinction Coeff. Oxidized 35910.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 15885.52

LogP -130.46

H-bond Donors 278.0

H-bond Acceptors 659.0

Rotatable Bonds 883.0

Heavy Atoms 2947.0

Ring Count 65.0

Amide Bonds 824.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0430826 VERIFIED: NO

Provenance & Taxonomy

OrganismMus musculus [other]

Tax ID10090

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

N-TermNone

C-TermNone

Bio-Activity Profile

Function

Binding / Molecular interaction Calcium binding Metal binding