Peptide Database

Peptide NameSynaptotagmin-2

Function Ontology

Binding / Molecular interaction

Binding / Molecular interaction ▸ Calcium binding

Binding / Molecular interaction ▸ Metal binding

Standard StatusStandard

Sequence Length422 amino acids

Chemical FormulaC2103H2521N555O206S23

DescriptionStandard

        MRNIFKRNQEPIVAPATTTATMPLAPAAPADNSTESTGTGESQEDMFAKLKDKFFNEINKIPLPPWALIAMAVVAGLLLLTCCFCICKKCCCKKKKNKKEKGKGMKNAMNMKDMKGGQDDDDAETGLTEGEGEGEEEKEPENLGKLQFSLDYDFQANQLTVGVLQAAELPALDMGGTSDPYVKVFLLPDKKKKYETKVHRKTLNPAFNETFTFKVPYQELGGKTLVMAIYDFDRFSKHDIIGEVKVPMNTVDLGQPIEEWRDLQGGEKEEPEKLGDICTSLRYVPTAGKLTVCILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTVKKKTLNPYFNESFSFEIPFEQIQKVQVVVTVLDYDKLGKNEAIGKIFVGSNATGTELRHWSDMLANPRRPIAQWHSLKPEEEVDALLGKNK
    

Molecular Weight47209.05 Da

Isoelectric Point (pI)7.86

Net Charge (pH 7.0)2.94

Net Charge (pH 7.4) 1.88

Charge Density (pH 7.0) 0.0070

GRAVY Index-0.51

Hydrophobic Moment 0.06

Boman Index-0.05

Instability Index35.67

Aliphatic Index 76.26

Aromaticity 0.0853

Extinction Coeff. Reduced 35410.00

Extinction Coeff. Oxidized 35910.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 15871.45

LogP -129.95

H-bond Donors 279.0

H-bond Acceptors 659.0

Rotatable Bonds 883.0

Heavy Atoms 2943.0

Ring Count 64.0

Amide Bonds 823.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0430822 VERIFIED: NO

Provenance & Taxonomy

OrganismRattus norvegicus [other]

Tax ID10116

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

N-TermNone

C-TermNone

Bio-Activity Profile

Function

Binding / Molecular interaction Calcium binding Metal binding