Peptide Database

Peptide NameSynaptotagmin 2

Function Ontology

Binding / Molecular interaction

Binding / Molecular interaction ▸ Calcium binding

Binding / Molecular interaction ▸ Metal binding

Standard StatusStandard

Sequence Length369 amino acids

Chemical FormulaC1888H2236N514O191S18

DescriptionStandard

        MWATGAIVCSPVFRILSTCCPIRRGVPTSNGYHPRPKHVDIGNGAVPILSSKPITVQPTNSDYYEPVNNGTLPLSSSGALIKQYGNIHFRVEYDFEQSKLSVTIVSASDLPAMDRNGMSDPYVKVYVLPERKQKFETRIIRNTLNPTYNETFQFSIPFNELHSKTLMLVVYDYDRLSKDDKMGQLSVPLESIDFGITTDIERPLQKPEKDDEKECRLGDICFSTRYRPATGTVTLTIMEARNLKKMDVGGSSDPYVKIYLHHGRKLLSKKKTSRKYKTLNPYYNESFQFKIEPHMIEKVHLIVSVWDYDKMSKNDFIGEVTLGSKHLNLPQITHACSEQWAEMMTSRRPVVQWHTLQERMEKEKKKDDD
    

Molecular Weight42410.09 Da

Isoelectric Point (pI)8.73

Net Charge (pH 7.0)6.65

Net Charge (pH 7.4) 5.52

Charge Density (pH 7.0) 0.0180

GRAVY Index-0.57

Hydrophobic Moment 0.03

Boman Index-0.08

Instability Index40.72

Aliphatic Index 76.26

Aromaticity 0.1192

Extinction Coeff. Reduced 47330.00

Extinction Coeff. Oxidized 47705.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 14460.46

LogP -93.50

H-bond Donors 277.0

H-bond Acceptors 595.0

Rotatable Bonds 757.0

Heavy Atoms 2654.0

Ring Count 72.0

Amide Bonds 722.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0430731 VERIFIED: NO

Provenance & Taxonomy

OrganismCaenorhabditis elegans [other]

Tax ID6239

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

N-TermNone

C-TermNone

Bio-Activity Profile

Function

Binding / Molecular interaction Calcium binding Metal binding