Peptide Database

Peptide NamePeptide chain C in PDB 3WOO

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length5 amino acids

Chemical FormulaC31H45N7O7

DescriptionStandard

        VYIHP
    

Molecular Weight627.73 Da

Isoelectric Point (pI)6.71

Net Charge (pH 7.0)-0.18

Net Charge (pH 7.4) -0.44

Charge Density (pH 7.0) -0.0360

GRAVY Index0.52

Hydrophobic Moment 0.08

Boman Index0.49

Instability Index11.84

Aliphatic Index 136.00

Aromaticity 0.2000

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1490.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 219.84

LogP 0.46

H-bond Donors 7.0

H-bond Acceptors 8.0

Rotatable Bonds 15.0

Heavy Atoms 45.0

Ring Count 3.0

Amide Bonds 4.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0019283 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 3WOO receptor chain A

MethodProtein-peptide complex structure