Peptide Database

Peptide Namecycloviolacin Y5

Function Ontology

Antiparasitic ▸ Anthelminthic

Antiparasitic ▸ Anthelminthic ▸ Nematicidal activity

Standard StatusStandard

Sequence Length29 amino acids

Chemical FormulaC129H204N32O41S5

DescriptionStandard

        GIPAESCVWIPCTVTALVGCSCSDKVCYN
    

Molecular Weight3019.51 Da

Isoelectric Point (pI)4.37

Net Charge (pH 7.0)-1.29

Net Charge (pH 7.4) -1.57

Charge Density (pH 7.0) -0.0444

GRAVY Index0.73

Hydrophobic Moment 0.28

Boman Index0.29

Instability Index34.84

Aliphatic Index 87.24

Aromaticity 0.0690

Extinction Coeff. Reduced 6990.00

Extinction Coeff. Oxidized 7240.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1141.42

LogP -12.55

H-bond Donors 44.0

H-bond Acceptors 45.0

Rotatable Bonds 90.0

Heavy Atoms 207.0

Ring Count 5.0

Amide Bonds 29.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0187241 VERIFIED: YES

Provenance & Taxonomy

OrganismViola odorata [Plant]

FamilyCyclotide

Tax ID97441

Structure & Mods

Confighead-to-tail cyclic peptide [Cyclic]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Nematocidal Anthelmintic

TargetHaemonchus contortus

Activity2.28

MethodIC50

RECORD: Rec_0401149 VERIFIED: YES