Peptide Database

Peptide NameWAMP-1a

Function Ontology

—

Standard StatusStandard

Sequence Length41 amino acids

Chemical FormulaC170H253N53O56S8

DescriptionStandard

        AEQCGWQAGGAVCPNGLCCSQYGWCGTVNAYCGAGCQSQCR
    

Molecular Weight4191.67 Da

Isoelectric Point (pI)5.98

Net Charge (pH 7.0)-0.28

Net Charge (pH 7.4) -0.59

Charge Density (pH 7.0) -0.0069

GRAVY Index-0.07

Hydrophobic Moment 0.27

Boman Index0.13

Instability Index28.99

Aliphatic Index 35.85

Aromaticity 0.0976

Extinction Coeff. Reduced 13980.00

Extinction Coeff. Oxidized 14480.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1752.09

LogP -25.84

H-bond Donors 67.0

H-bond Acceptors 64.0

Rotatable Bonds 129.0

Heavy Atoms 287.0

Ring Count 7.0

Amide Bonds 47.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0366780 VERIFIED: YES

Provenance & Taxonomy

OrganismCucumis melo [Plant]

Structure & Mods

ConfigDNA-encoded linear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)