Peptide Database

Peptide NamePeptide chain B in PDB 3BOO

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length6 amino acids

Chemical FormulaC30H58N10O8S

DescriptionStandard

        RATKML
    

Molecular Weight718.91 Da

Isoelectric Point (pI)11.00

Net Charge (pH 7.0)1.76

Net Charge (pH 7.4) 1.55

Charge Density (pH 7.0) 0.2932

GRAVY Index-0.27

Hydrophobic Moment 0.79

Boman Index-0.29

Instability Index62.67

Aliphatic Index 81.67

Aromaticity 0.0000

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 316.97

LogP -2.59

H-bond Donors 12.0

H-bond Acceptors 11.0

Rotatable Bonds 25.0

Heavy Atoms 49.0

Ring Count 0.0

Amide Bonds 5.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0100662 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 3BOO receptor chain A

MethodProtein-peptide complex structure