Peptide Database

Peptide NameParigidin-br1

Function Ontology

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Standard StatusStandard

Sequence Length32 amino acids

Chemical FormulaC147H234N40O43S6

DescriptionStandard

        NGVIPCGESCVFIPCISSFLGCSCKNKVCYRN
    

Molecular Weight3442.06 Da

Isoelectric Point (pI)8.33

Net Charge (pH 7.0)1.70

Net Charge (pH 7.4) 1.40

Charge Density (pH 7.0) 0.0531

GRAVY Index0.48

Hydrophobic Moment 0.36

Boman Index0.16

Instability Index29.50

Aliphatic Index 75.94

Aromaticity 0.0938

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1865.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1329.50

LogP -15.52

H-bond Donors 51.0

H-bond Acceptors 51.0

Rotatable Bonds 109.0

Heavy Atoms 236.0

Ring Count 5.0

Amide Bonds 34.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0378223 VERIFIED: YES

Provenance & Taxonomy

OrganismPombalia lanata [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)