Peptide Database

Peptide NameVv-AMP1

Function Ontology

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Standard StatusStandard

Sequence Length27 amino acids

Chemical FormulaC122H204N46O42S3

DescriptionStandard

        RTCESQSHRFKGTRVRQSNCAAVCQTE
    

Molecular Weight3083.40 Da

Isoelectric Point (pI)9.22

Net Charge (pH 7.0)2.83

Net Charge (pH 7.4) 2.52

Charge Density (pH 7.0) 0.1047

GRAVY Index-1.06

Hydrophobic Moment 0.45

Boman Index-0.43

Instability Index55.00

Aliphatic Index 28.89

Aromaticity 0.0370

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 125.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1490.56

LogP -23.31

H-bond Donors 57.0

H-bond Acceptors 49.0

Rotatable Bonds 105.0

Heavy Atoms 213.0

Ring Count 2.0

Amide Bonds 30.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0219099 VERIFIED: YES

Provenance & Taxonomy

OrganismVitis vinifera [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)