Peptide Database

Peptide NamePeptide chain E in PDB 5MK1

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length11 amino acids

Chemical FormulaC58H92N14O18

DescriptionStandard

        EALKQLAEWVS
    

Molecular Weight1273.43 Da

Isoelectric Point (pI)4.53

Net Charge (pH 7.0)-1.16

Net Charge (pH 7.4) -1.33

Charge Density (pH 7.0) -0.1056

GRAVY Index-0.06

Hydrophobic Moment 0.59

Boman Index0.11

Instability Index1.48

Aliphatic Index 115.45

Aromaticity 0.0909

Extinction Coeff. Reduced 5500.00

Extinction Coeff. Oxidized 5500.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 534.05

LogP -3.13

H-bond Donors 18.0

H-bond Acceptors 17.0

Rotatable Bonds 42.0

Heavy Atoms 90.0

Ring Count 2.0

Amide Bonds 11.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0385915 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5MK1 receptor chain A

MethodProtein-peptide complex structure