Peptide Database

Peptide NamePeptide chain B in PDB 3M56

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length5 amino acids

Chemical FormulaC22H41N9O10

DescriptionStandard

        SKSDR
    

Molecular Weight591.62 Da

Isoelectric Point (pI)8.46

Net Charge (pH 7.0)0.46

Net Charge (pH 7.4) 0.25

Charge Density (pH 7.0) 0.0921

GRAVY Index-2.70

Hydrophobic Moment 0.62

Boman Index-1.06

Instability Index-7.08

Aliphatic Index 0.00

Aromaticity 0.0000

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 345.40

LogP -5.81

H-bond Donors 13.0

H-bond Acceptors 11.0

Rotatable Bonds 21.0

Heavy Atoms 41.0

Ring Count 0.0

Amide Bonds 4.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0067351 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 3M56 receptor chain A

MethodProtein-peptide complex structure