Peptide Database

Peptide NameMembrane protein involved in colicin uptake

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Enzyme / Catalytic activity ▸ Hydrolase

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length528 amino acids

Chemical FormulaC2472H3938N712O774S11

DescriptionStandard

        MDGAVTPYGPAYSKWVASFKAGYSAKLLTEHIQLLNSQQAHVQNLLAGAQSEERRVAAEQEAQRVAAEQARIRAEAEALAHAQEQARLAALAEAERVAAEQARIAAEAAARYIAAEQARLEAEAEVQRQAEQLRLEMQRQAEEQALRDAMETLNAGKGIRPFPVSGAAAANGPVFAVGAGTLAIETATALAIRTALRSAAATAITALAAAVGAASGVVIVVGVAALVYYALRDNKEPYGLSVPLSDLTTYDDNQLRAVAQANGDIELPVAVGTRTVDNTTEFSVAATNVTSVSRKVPVRLATYDPGLNVYRTESSTAQSPGMTWTPIVSPGDASTALPAAQPDVAPYTGATATALEGRIDENPELDLYSFGGFVYVFPIDSGIPPQFVMFRDRRNEPGVSNGSGQLVSGNWMGTASMPEGAPIPAQIADKLRGRRFSTFNNFRSEFWKAVSNDELLNGQFTKLRQMDMKQGLAPAASPQDQVGKRIKYEIHHIIPIAEGGEVYDMDNLQIMTPKSHIQTHTKAKGVKE
    

Molecular Weight56368.73 Da

Isoelectric Point (pI)5.43

Net Charge (pH 7.0)-9.79

Net Charge (pH 7.4) -10.48

Charge Density (pH 7.0) -0.0185

GRAVY Index-0.21

Hydrophobic Moment 0.65

Boman Index0.03

Instability Index39.57

Aliphatic Index 83.90

Aromaticity 0.0625

Extinction Coeff. Reduced 44350.00

Extinction Coeff. Oxidized 44350.00

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Amino Acid Composition

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0043534 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas sp. GM78 [Bacterium]

FamilyColicin/Pyocin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antibiotic Antimicrobial Bacteriocin Hydrolase Non-hemolytic Non-ribosomal

MethodQualitative functional evidence