Peptide Database

Peptide NameAntimicrobial peptide 53

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length23 amino acids

Chemical FormulaC118H179N33O41

DescriptionStandard

        QPGEKEEDEDEQPRPIPFPRPQP
    

Molecular Weight2715.88 Da

Isoelectric Point (pI)4.25

Net Charge (pH 7.0)-4.22

Net Charge (pH 7.4) -4.44

Charge Density (pH 7.0) -0.1837

GRAVY Index-2.27

Hydrophobic Moment 0.37

Boman Index-0.47

Instability Index104.77

Aliphatic Index 16.96

Aromaticity 0.0435

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1182.18

LogP -11.75

H-bond Donors 34.0

H-bond Acceptors 37.0

Rotatable Bonds 82.0

Heavy Atoms 192.0

Ring Count 8.0

Amide Bonds 25.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0408453 VERIFIED: NO

Provenance & Taxonomy

OrganismGlycine max [Plant]

Tax ID3847

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial