Peptide Database

Peptide NameCycloviolacin H4

Function Ontology

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Standard StatusStandard

Sequence Length29 amino acids

Chemical FormulaC129H205N31O40S6

DescriptionStandard

        GIPCAESCVWIPCTVTALVGCSCSEKVCY
    

Molecular Weight3022.58 Da

Isoelectric Point (pI)4.53

Net Charge (pH 7.0)-1.30

Net Charge (pH 7.4) -1.59

Charge Density (pH 7.0) -0.0447

GRAVY Index0.94

Hydrophobic Moment 0.23

Boman Index0.34

Instability Index35.17

Aliphatic Index 87.24

Aromaticity 0.0690

Extinction Coeff. Reduced 6990.00

Extinction Coeff. Oxidized 7365.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1098.33

LogP -11.10

H-bond Donors 44.0

H-bond Acceptors 45.0

Rotatable Bonds 90.0

Heavy Atoms 206.0

Ring Count 5.0

Amide Bonds 28.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0232829 VERIFIED: YES

Provenance & Taxonomy

OrganismViola tricolor [Plant]

FamilyCyclotide

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

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TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)