Peptide Database

Peptide NameLysin A

Function Ontology

Antimicrobial

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length531 amino acids

Chemical FormulaC2485H3773N717O727S15

DescriptionStandard

        MPLQAGTHVTSPFGPRDGGFHGGTDFGKTGGSAGLPVYACQSGTVIHAGAASGYGGPDPAGWLVIDSSDEQGAGCVEYGHIIREVANGAKVTAGQRIGRINPNRDTNGGVAPHLHLTVWAREYGGTRIDPVPWLRGSPHPGTPTAPAAPKPTTPGAAPMAFDYGITHTIFGYNAGSAGTGNSNGRRPRTDHAAAHTQEGGTGDAIGLARYCIGAQVGYNIIVDDERTVLNVPNIEGSWSAADANNIAWHLCFAGSYASWSAGRWLSRDAADGLNEDAMLWRGAKAFAAACLEFKIPVEWVGAIVYADSNWPPRRGICGHVSFGRRGGGHTDPGRGFPIAEFIRRVQSFMKSATAPAPINLIEQEAAVARAWIGKRLAEPGQKGETPILDGGVKIGAFVPYERGHVYWKMGAKLAYAIPHGGMFEAFQARGFEDGIGFPVLRHDVVTAHGITGGVQSFDRGVLMTPTDGPTAGLLVHGEIGKVYAAQEWEQGALGWPRSDEYAYPQMGKGCIRQDFAGGSLVYTPTGVVSVS
    

Molecular Weight55804.88 Da

Isoelectric Point (pI)6.65

Net Charge (pH 7.0)-1.94

Net Charge (pH 7.4) -3.27

Charge Density (pH 7.0) -0.0037

GRAVY Index-0.22

Hydrophobic Moment 0.78

Boman Index0.11

Instability Index35.71

Aliphatic Index 69.92

Aromaticity 0.0942

Extinction Coeff. Reduced 102330.00

Extinction Coeff. Oxidized 102705.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0179471 VERIFIED: NO

Provenance & Taxonomy

OrganismGordonia phage Zipp [Virus]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Non-hemolytic Non-ribosomal