Peptide Database

Peptide NamePeptide chain C in PDB 5D2A

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length6 amino acids

Chemical FormulaC29H45N7O7S

DescriptionStandard

        APAKFC
    

Molecular Weight635.78 Da

Isoelectric Point (pI)8.27

Net Charge (pH 7.0)0.79

Net Charge (pH 7.4) 0.58

Charge Density (pH 7.0) 0.1308

GRAVY Index0.57

Hydrophobic Moment 0.36

Boman Index0.22

Instability Index72.53

Aliphatic Index 33.33

Aromaticity 0.1667

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 226.05

LogP -1.33

H-bond Donors 8.0

H-bond Acceptors 9.0

Rotatable Bonds 17.0

Heavy Atoms 44.0

Ring Count 2.0

Amide Bonds 5.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0085229 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5D2A receptor chain A

MethodProtein-peptide complex structure