Peptide Database

Peptide NameS-type pyocin domain-containing protein

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length510 amino acids

Chemical FormulaC2471H3901N719O735S8

DescriptionStandard

        MELRSRLDQYDEQSFLRLIEDIWHVQTDKVSHEALISHFNRIVGHPAGSDLLFYPEPDEAGSINSPDEVVATLKRWYLRQGRAAFKGQVLPSPASHQPLTREQRAVQASNRNLEQSRKLIADIQSATRRGAHTLAVLEQQLAIEPSAGTPEQQLSACLGTLRNLESAQIQAQQALAALENLEVSVQFAVSDAARNVSSPFFNVGIQTVVLKEITPVGQHYAAALAAARQQHPALYQRGAARIESLESHIAQLTVATDSGPGRGPLTLRAPLHSAGLHPALLTVQGLSREVARQQHRLTQTFQSALAELQWQAAASLEDHPGIYVDVLQFVLGAPSDDPRFAVSVPLAALYSEGEADWQGLAKVRGDIQMPFRMCTLFESVAGGPRSFGVKPHLKHSHVLLTTTQGSRVPSRVPVRMASWQAAHQAWAYSGEGRAPVTVLWQQGDAPYAAEDSARPASISFLSLPSVPLVGTFANLERLRFDDCIVVFPAESGLEPLYLMLRDRRELPGGA
    

Molecular Weight55697.30 Da

Isoelectric Point (pI)6.29

Net Charge (pH 7.0)-4.96

Net Charge (pH 7.4) -6.17

Charge Density (pH 7.0) -0.0097

GRAVY Index-0.19

Hydrophobic Moment 0.78

Boman Index0.03

Instability Index54.41

Aliphatic Index 91.90

Aromaticity 0.0667

Extinction Coeff. Reduced 53400.00

Extinction Coeff. Oxidized 53525.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0421587 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas plecoglossicida NB2011 [Bacterium]

FamilyPyocin/Colicin

Tax ID1330531

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antibiotic Antimicrobial Bacteriocin Non-hemolytic Non-ribosomal