Peptide Database

Peptide NamePeptide chain B in PDB 1V6D

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length5 amino acids

Chemical FormulaC24H41N5O8

DescriptionStandard

        PDLLA
    

Molecular Weight527.61 Da

Isoelectric Point (pI)4.05

Net Charge (pH 7.0)-1.04

Net Charge (pH 7.4) -1.10

Charge Density (pH 7.0) -0.2081

GRAVY Index0.86

Hydrophobic Moment 0.36

Boman Index0.39

Instability Index-7.08

Aliphatic Index 176.00

Aromaticity 0.0000

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 203.03

LogP -0.65

H-bond Donors 7.0

H-bond Acceptors 7.0

Rotatable Bonds 15.0

Heavy Atoms 37.0

Ring Count 1.0

Amide Bonds 4.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0017549 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 1V6D receptor chain A

MethodProtein-peptide complex structure