Peptide Database

Peptide NamePeptide chain B in PDB 1JH4

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length22 amino acids

Chemical FormulaC111H164N24O35S

DescriptionStandard

        VLMSKLSVNAPEFYPSGYSSSY
    

Molecular Weight2426.69 Da

Isoelectric Point (pI)5.97

Net Charge (pH 7.0)-0.27

Net Charge (pH 7.4) -0.49

Charge Density (pH 7.0) -0.0121

GRAVY Index-0.03

Hydrophobic Moment 0.33

Boman Index0.19

Instability Index85.15

Aliphatic Index 66.36

Aromaticity 0.1818

Extinction Coeff. Reduced 4470.00

Extinction Coeff. Oxidized 4470.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 945.32

LogP -9.69

H-bond Donors 33.0

H-bond Acceptors 36.0

Rotatable Bonds 73.0

Heavy Atoms 171.0

Ring Count 6.0

Amide Bonds 22.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0293949 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 1JH4 receptor chain A

MethodProtein-peptide complex structure