Peptide Database

Peptide NameLysozyme (EC 3.2.1.17)

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Bacteriolytic activity ▸ Bacteriolytic enzyme

Enzyme / Catalytic activity ▸ Hydrolase

Enzyme / Catalytic activity ▸ Hydrolase ▸ Glycosidase

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length191 amino acids

Chemical FormulaC896H1411N269O263S9

DescriptionStandard

        MGKNIFRRFRRRPASAEKGGASPRQLLTVLALSAAGLVGIVAREGYSDKAYPDPVHGTAVPTIGFGTTGGVRMGDTTTPVPALHRALHDVQTYESALKQCVQVPLHQYEYDAYVSLAYNIGAFNFCTGGRAGRTSMLVQRLNRGDYAGACDAILGWKYAGTTDCSAPGNKTCGGLWKDRLRLHAQCQGNAP
    

Molecular Weight20448.02 Da

Isoelectric Point (pI)9.45

Net Charge (pH 7.0)8.88

Net Charge (pH 7.4) 8.29

Charge Density (pH 7.0) 0.0465

GRAVY Index-0.27

Hydrophobic Moment 0.95

Boman Index0.01

Instability Index41.39

Aliphatic Index 73.14

Aromaticity 0.0838

Extinction Coeff. Reduced 24410.00

Extinction Coeff. Oxidized 24785.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 8505.33

LogP -105.37

H-bond Donors 305.0

H-bond Acceptors 286.0

Rotatable Bonds 658.0

Heavy Atoms 1437.0

Ring Count 33.0

Amide Bonds 204.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0098725 VERIFIED: NO

Provenance & Taxonomy

OrganismVariovorax paradoxus [Bacterium]

FamilyLysozyme

Structure & Mods

Configlinear polypeptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Bacteriolytic enzyme Glycosidase Hydrolase Non-hemolytic

MethodQualitative functional evidence