Peptide Database

Peptide NamePeptide chain B in PDB 1VYJ

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length16 amino acids

Chemical FormulaC89H143N23O23

DescriptionStandard

        SAVLQKKITDYFHPKK
    

Molecular Weight1903.23 Da

Isoelectric Point (pI)9.82

Net Charge (pH 7.0)2.54

Net Charge (pH 7.4) 2.28

Charge Density (pH 7.0) 0.1590

GRAVY Index-0.82

Hydrophobic Moment 0.51

Boman Index-0.17

Instability Index22.64

Aliphatic Index 73.12

Aromaticity 0.1250

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1490.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 764.87

LogP -5.27

H-bond Donors 26.0

H-bond Acceptors 27.0

Rotatable Bonds 64.0

Heavy Atoms 135.0

Ring Count 4.0

Amide Bonds 16.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0229503 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 1VYJ receptor chain A

MethodProtein-peptide complex structure