Peptide Database

Peptide NamePeptide chain B in PDB 5E24

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length38 amino acids

Chemical FormulaC197H311N57O53

DescriptionStandard

        GGRLQFFKDGKFILELARSKDGDKSGWVSVTRKTFRPP
    

Molecular Weight4325.93 Da

Isoelectric Point (pI)10.53

Net Charge (pH 7.0)4.76

Net Charge (pH 7.4) 4.55

Charge Density (pH 7.0) 0.1253

GRAVY Index-0.73

Hydrophobic Moment 0.61

Boman Index-0.18

Instability Index39.95

Aliphatic Index 58.95

Aromaticity 0.1316

Extinction Coeff. Reduced 5500.00

Extinction Coeff. Oxidized 5500.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1809.37

LogP -17.29

H-bond Donors 65.0

H-bond Acceptors 58.0

Rotatable Bonds 146.0

Heavy Atoms 307.0

Ring Count 8.0

Amide Bonds 38.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0115917 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5E24 receptor chain F

MethodProtein-peptide complex structure