Peptide Database

Peptide NameAntimicrobial peptide PpPR-AMP1

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length46 amino acids

Chemical FormulaC257H370N72O52

DescriptionStandard

        VLPAAATSYFPGGQRFPGRFPRPPIPRPFPRPGFPRPFPPRPYPWR
    

Molecular Weight5300.14 Da

Isoelectric Point (pI)12.00

Net Charge (pH 7.0)7.73

Net Charge (pH 7.4) 7.52

Charge Density (pH 7.0) 0.1681

GRAVY Index-0.80

Hydrophobic Moment 0.76

Boman Index-0.08

Instability Index76.88

Aliphatic Index 29.78

Aromaticity 0.1957

Extinction Coeff. Reduced 8480.00

Extinction Coeff. Oxidized 8480.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1867.18

LogP -11.53

H-bond Donors 61.0

H-bond Acceptors 60.0

Rotatable Bonds 135.0

Heavy Atoms 381.0

Ring Count 26.0

Amide Bonds 46.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0173385 VERIFIED: NO

Provenance & Taxonomy

OrganismPortunus pelagicus [Animal]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial