Peptide Database

Peptide NamePenicillin-binding protein

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Bacteriolytic activity ▸ Bacteriolytic enzyme

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length73 amino acids

Chemical FormulaC380H599N97O122S

DescriptionStandard

        VDKKLLRKQLEEDEGIRYSIYLDHLDYPTFGIGHLITKIDPEYGLEIGTEINEDRVAEAFEQDIKIVLSDCER
    

Molecular Weight8510.46 Da

Isoelectric Point (pI)4.48

Net Charge (pH 7.0)-9.07

Net Charge (pH 7.4) -9.44

Charge Density (pH 7.0) -0.1243

GRAVY Index-0.50

Hydrophobic Moment 0.69

Boman Index-0.06

Instability Index28.68

Aliphatic Index 105.48

Aromaticity 0.0822

Extinction Coeff. Reduced 5960.00

Extinction Coeff. Oxidized 5960.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 3558.74

LogP -26.92

H-bond Donors 122.0

H-bond Acceptors 116.0

Rotatable Bonds 292.0

Heavy Atoms 600.0

Ring Count 10.0

Amide Bonds 75.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0421122 VERIFIED: NO

Provenance & Taxonomy

Organismmarine metagenome [other]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Bacteriolytic enzyme Non-hemolytic Non-ribosomal