Peptide Database

Peptide NameVv-AMP1

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Anti-Gram-negative

Standard StatusStandard

Sequence Length27 amino acids

Chemical FormulaC129H212N46O41S4

DescriptionStandard

        RTCLSQSHRFRGYCVRSSNCKQICQTE
    

Molecular Weight3191.61 Da

Isoelectric Point (pI)9.30

Net Charge (pH 7.0)3.81

Net Charge (pH 7.4) 3.49

Charge Density (pH 7.0) 0.1412

GRAVY Index-0.87

Hydrophobic Moment 0.40

Boman Index-0.38

Instability Index66.53

Aliphatic Index 39.63

Aromaticity 0.0741

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1740.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1473.49

LogP -21.29

H-bond Donors 58.0

H-bond Acceptors 50.0

Rotatable Bonds 108.0

Heavy Atoms 220.0

Ring Count 3.0

Amide Bonds 30.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0099468 VERIFIED: YES

Provenance & Taxonomy

OrganismPinus sylvestris [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Anti-Gram-negative

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)