Peptide Database

Peptide NameLysin A

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Bacteriolytic activity ▸ Bacteriolytic enzyme

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length414 amino acids

Chemical FormulaC2062H3146N570O601S12

DescriptionStandard

        MAATKDQVAQIIVTEAKARGYTREETRAIMSMLYQESRWDETIWGPSGKKITYGIAQQDGSYPNRFNGAAAQIKGFFDKFDVWRRKPGASGDIWLDIAWMQQAPNWESAAYWYASGRRAYLTEIKQHINTVTPYLDKYWPSTTGGTVAVSGDPVWLEDVLRPALGDRLRTLPGWKTDGVGGTMKEIWGIMWHHTGNSNEKPESISVGRPDLRGPLAQIHIAPSGIVTIVAVGPCNHAGLGSYPGLPTNNANQYTIGIECAWPTPRKDLPLGYDPNERWPDAQIISMRDVGAAITKHLGFDASRNISHKEWAGAAQGKWDPGNLDMNWFRGEIQKDMDGFVFPGETPGEAPQQPGPILAPDYTKEVWDQLRIEWPQLGGRTLVDAVAAIGEKLGIPGCYDVKARTSRFAQLDIKE
    

Molecular Weight45921.28 Da

Isoelectric Point (pI)6.04

Net Charge (pH 7.0)-3.86

Net Charge (pH 7.4) -4.58

Charge Density (pH 7.0) -0.0093

GRAVY Index-0.49

Hydrophobic Moment 0.62

Boman Index0.02

Instability Index34.60

Aliphatic Index 72.66

Aromaticity 0.1014

Extinction Coeff. Reduced 125360.00

Extinction Coeff. Oxidized 125485.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0055957 VERIFIED: NO

Provenance & Taxonomy

OrganismMycobacterium phage Ryadel [Virus]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Bacteriolytic enzyme Non-hemolytic Non-ribosomal