Peptide Database

Peptide NameCarnobacteriocin BM1

Function Ontology

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Standard StatusStandard

Sequence Length41 amino acids

Chemical FormulaC192H283N53O59S3

DescriptionStandard

        SYDNGIYCNNSKCWVNWGEAKENIAGIVISGWASGLAGMGH
    

Molecular Weight4373.82 Da

Isoelectric Point (pI)5.42

Net Charge (pH 7.0)-1.47

Net Charge (pH 7.4) -1.77

Charge Density (pH 7.0) -0.0358

GRAVY Index-0.15

Hydrophobic Moment 0.36

Boman Index0.20

Instability Index12.52

Aliphatic Index 71.46

Aromaticity 0.1220

Extinction Coeff. Reduced 19480.00

Extinction Coeff. Oxidized 19605.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1804.14

LogP -19.71

H-bond Donors 64.0

H-bond Acceptors 62.0

Rotatable Bonds 140.0

Heavy Atoms 307.0

Ring Count 9.0

Amide Bonds 45.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0253160 VERIFIED: YES

Provenance & Taxonomy

OrganismEnterococcus faecium [Bacterium]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

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TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)