Peptide Database

Peptide NameSD2

Function Ontology

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Standard StatusStandard

Sequence Length34 amino acids

Chemical FormulaC153H246N54O49S4

DescriptionStandard

        GPVTVEARTCESKSHKFRGPCVSRHNCANVCHNE
    

Molecular Weight3754.18 Da

Isoelectric Point (pI)8.54

Net Charge (pH 7.0)1.99

Net Charge (pH 7.4) 1.57

Charge Density (pH 7.0) 0.0586

GRAVY Index-0.78

Hydrophobic Moment 0.42

Boman Index-0.23

Instability Index52.57

Aliphatic Index 40.00

Aromaticity 0.0294

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 250.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1672.14

LogP -23.80

H-bond Donors 62.0

H-bond Acceptors 58.0

Rotatable Bonds 121.0

Heavy Atoms 260.0

Ring Count 6.0

Amide Bonds 36.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0366683 VERIFIED: YES

Provenance & Taxonomy

OrganismBrassica napus [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)