Peptide Database

Peptide NameAntimicrobial peptide VIP_3

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length28 amino acids

Chemical FormulaC143H222N40O42S

DescriptionStandard

        HSDGIFTDSYSRYRKQMAVQKYLAAVLG
    

Molecular Weight3205.60 Da

Isoelectric Point (pI)9.40

Net Charge (pH 7.0)1.84

Net Charge (pH 7.4) 1.58

Charge Density (pH 7.0) 0.0659

GRAVY Index-0.40

Hydrophobic Moment 0.44

Boman Index-0.05

Instability Index24.49

Aliphatic Index 73.21

Aromaticity 0.1429

Extinction Coeff. Reduced 4470.00

Extinction Coeff. Oxidized 4470.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1355.93

LogP -13.31

H-bond Donors 49.0

H-bond Acceptors 46.0

Rotatable Bonds 106.0

Heavy Atoms 226.0

Ring Count 5.0

Amide Bonds 29.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0070189 VERIFIED: NO

Provenance & Taxonomy

OrganismBoleophthalmus pectinirostris [Animal]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial