Peptide Database

Peptide Name3B

Function Ontology

Structural component

Standard StatusStandard

Sequence Length13 amino acids

Chemical FormulaC43H69N13O15

DescriptionStandard

        PGPVGAAGATGPG
    

Molecular Weight1008.09 Da

Isoelectric Point (pI)5.96

Net Charge (pH 7.0)-0.04

Net Charge (pH 7.4) -0.10

Charge Density (pH 7.0) -0.0032

GRAVY Index0.16

Hydrophobic Moment 0.07

Boman Index0.43

Instability Index-2.08

Aliphatic Index 45.38

Aromaticity 0.0000

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 401.18

LogP -7.09

H-bond Donors 13.0

H-bond Acceptors 15.0

Rotatable Bonds 25.0

Heavy Atoms 71.0

Ring Count 3.0

Amide Bonds 12.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0214178 VERIFIED: YES

Provenance & Taxonomy

Organismsynthetic construct [Synthetic]

FamilyCollagen peptide

Tax ID32630

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

N-TermAcetylation

C-TermAmidation

Other ModsComposite modified token POG

Bio-Activity Profile

Function

Structural component

MethodHPLC and MALDI-TOF

Half-LifeNot reported, in vitro; 345 s