Peptide Database

Peptide NameApo5 APOC1

Function Ontology

—

Standard StatusStandard

Sequence Length23 amino acids

Chemical FormulaC126H198N32O35

DescriptionStandard

        TKTRAWFSETFGKVKEKLKTTFS
    

Molecular Weight2721.11 Da

Isoelectric Point (pI)10.17

Net Charge (pH 7.0)3.40

Net Charge (pH 7.4) 3.20

Charge Density (pH 7.0) 0.1478

GRAVY Index-0.83

Hydrophobic Moment 0.47

Boman Index-0.20

Instability Index12.65

Aliphatic Index 33.91

Aromaticity 0.1739

Extinction Coeff. Reduced 5500.00

Extinction Coeff. Oxidized 5500.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1127.52

LogP -10.60

H-bond Donors 42.0

H-bond Acceptors 39.0

Rotatable Bonds 93.0

Heavy Atoms 193.0

Ring Count 5.0

Amide Bonds 22.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0309724 VERIFIED: YES

Provenance & Taxonomy

OrganismMus caroli [Animal]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)