Peptide Database

Peptide NamePp-AMP1

Function Ontology

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Standard StatusStandard

Sequence Length41 amino acids

Chemical FormulaC172H287N55O54S6

DescriptionStandard

        KSCCPSTTARNIYNTCRFGGGSRPVCSGLSGCKIIGGTKCP
    

Molecular Weight4181.85 Da

Isoelectric Point (pI)9.38

Net Charge (pH 7.0)5.70

Net Charge (pH 7.4) 5.40

Charge Density (pH 7.0) 0.1389

GRAVY Index-0.17

Hydrophobic Moment 0.64

Boman Index-0.02

Instability Index62.44

Aliphatic Index 47.56

Aromaticity 0.0488

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1865.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1753.19

LogP -27.23

H-bond Donors 69.0

H-bond Acceptors 66.0

Rotatable Bonds 134.0

Heavy Atoms 287.0

Ring Count 5.0

Amide Bonds 42.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0319911 VERIFIED: YES

Provenance & Taxonomy

OrganismCapsella rubella [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

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TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)