Peptide Database

Peptide NamePeptide chain P in PDB 5KD7

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length9 amino acids

Chemical FormulaC47H70N12O11

DescriptionStandard

        IGPGRAFYV
    

Molecular Weight979.13 Da

Isoelectric Point (pI)8.75

Net Charge (pH 7.0)0.76

Net Charge (pH 7.4) 0.55

Charge Density (pH 7.0) 0.0843

GRAVY Index0.57

Hydrophobic Moment 0.19

Boman Index0.34

Instability Index45.11

Aliphatic Index 86.67

Aromaticity 0.2222

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1490.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 369.46

LogP -1.78

H-bond Donors 13.0

H-bond Acceptors 12.0

Rotatable Bonds 27.0

Heavy Atoms 70.0

Ring Count 3.0

Amide Bonds 8.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0120704 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5KD7 receptor chain A

MethodProtein-peptide complex structure