Peptide Database

Peptide NamepdBD-2

Function Ontology

—

Standard StatusStandard

Sequence Length36 amino acids

Chemical FormulaC187H277N59O52S5

DescriptionStandard

        DTDVQGWTCGYRGLCRKHCYAQEYMIGYHGCPRRYR
    

Molecular Weight4343.89 Da

Isoelectric Point (pI)8.85

Net Charge (pH 7.0)2.89

Net Charge (pH 7.4) 2.52

Charge Density (pH 7.0) 0.0804

GRAVY Index-1.01

Hydrophobic Moment 0.62

Boman Index-0.24

Instability Index30.08

Aliphatic Index 32.50

Aromaticity 0.1667

Extinction Coeff. Reduced 12950.00

Extinction Coeff. Oxidized 13200.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1821.39

LogP -17.78

H-bond Donors 71.0

H-bond Acceptors 62.0

Rotatable Bonds 137.0

Heavy Atoms 303.0

Ring Count 10.0

Amide Bonds 37.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0177361 VERIFIED: YES

Provenance & Taxonomy

OrganismCyprinus carpio [Animal]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)