Peptide Database

Peptide NameBnPRP1

Function Ontology

—

Standard StatusStandard

Sequence Length38 amino acids

Chemical FormulaC180H262N46O54S3

DescriptionStandard

        PPSQNPYGQPMAPPTQDPFGQPMAPPTQNPYGQPMAPP
    

Molecular Weight4030.48 Da

Isoelectric Point (pI)4.05

Net Charge (pH 7.0)-1.04

Net Charge (pH 7.4) -1.10

Charge Density (pH 7.0) -0.0274

GRAVY Index-1.21

Hydrophobic Moment 0.31

Boman Index0.02

Instability Index74.53

Aliphatic Index 7.89

Aromaticity 0.0789

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 2980.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1494.93

LogP -17.73

H-bond Donors 40.0

H-bond Acceptors 56.0

Rotatable Bonds 104.0

Heavy Atoms 283.0

Ring Count 17.0

Amide Bonds 45.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0237754 VERIFIED: YES

Provenance & Taxonomy

OrganismBrassica napus [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)