Peptide Database

Peptide NamepdBD-2

Function Ontology

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Standard StatusStandard

Sequence Length42 amino acids

Chemical FormulaC215H320N68O58S7

DescriptionStandard

        DTDAQGWTCGYRGLCRKHCYAQEYMIGYHGCPRRYRCCALRF
    

Molecular Weight5009.72 Da

Isoelectric Point (pI)8.89

Net Charge (pH 7.0)3.87

Net Charge (pH 7.4) 3.47

Charge Density (pH 7.0) 0.0922

GRAVY Index-0.71

Hydrophobic Moment 0.62

Boman Index-0.20

Instability Index31.80

Aliphatic Index 35.00

Aromaticity 0.1667

Extinction Coeff. Reduced 12950.00

Extinction Coeff. Oxidized 13325.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 2057.89

LogP -20.08

H-bond Donors 82.0

H-bond Acceptors 71.0

Rotatable Bonds 158.0

Heavy Atoms 348.0

Ring Count 11.0

Amide Bonds 43.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0325360 VERIFIED: YES

Provenance & Taxonomy

OrganismCyprinus carpio [Animal]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)