Peptide Database

Peptide NamePeptide chain Q in PDB 3LCA

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length4 amino acids

Chemical FormulaC19H30N4O11

DescriptionStandard

        EEVD
    

Molecular Weight490.46 Da

Isoelectric Point (pI)4.05

Net Charge (pH 7.0)-3.16

Net Charge (pH 7.4) -3.33

Charge Density (pH 7.0) -0.7890

GRAVY Index-1.57

Hydrophobic Moment 0.53

Boman Index-0.33

Instability Index51.42

Aliphatic Index 72.50

Aromaticity 0.0000

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 262.52

LogP -2.29

H-bond Donors 8.0

H-bond Acceptors 8.0

Rotatable Bonds 16.0

Heavy Atoms 34.0

Ring Count 0.0

Amide Bonds 3.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0308328 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 3LCA receptor chain A

MethodProtein-peptide complex structure