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MYP_162351
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Basic Information
Unnamed
Antimicrobial
Antimicrobial ▸ Antibacterial
Antimicrobial ▸ Antibacterial ▸ Anti-Gram-positive
Antimicrobial ▸ Antifungal
Standard
22 amino acids
C94H165N23O29
Standard
Sequence
TPALAVVTTVLPAAAVTTAKSV
Physicochemical Analysis
2081.45 Da
8.41
0.40
0.21
0.0181
1.27
0.25
0.43
28.09
128.64
0.0000
0.00
0.00
The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.
Residue Composition
Amino Acid Composition
Chemical Descriptors
804.24
-8.89
28.0
30.0
60.0
146.0
2.0
21.0
Structural Visualization
3D PDB MODEL
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2D CHEMICAL STRUCTURE
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Experimental Records
RECORD: Rec_0108340 VERIFIED: NO
Provenance & Taxonomy
not reported [other]
Structure & Mods
linear peptide [Linear]
canonical L-amino-acid peptide [L]
None
None
Bio-Activity Profile
Antimicrobial Antibacterial Antifungal Anti-Gram-positive
PaperCAMP: Collection of sequences and structures of antimicrobial peptides PMID24265220 Evidence URLhttps://pubmed.ncbi.nlm.nih.gov/24265220/
RECORD: Rec_0178716 VERIFIED: YES
Provenance & Taxonomy
Pseudomonas sp. strain DF41 [Bacterium]
Bacteriocin
Structure & Mods
Single-chain peptide backbone represented as a linear sequence entry [Linear]
canonical L-amino-acid peptide [L]
Bio-Activity Profile
Antimicrobial Antibacterial Antifungal Anti-Gram-positive
Bacillus species
PMID22838838 Evidence URLhttps://pubmed.ncbi.nlm.nih.gov/22838838/
RECORD: Rec_0207820 VERIFIED: YES
Provenance & Taxonomy
Pseudomonas brassicacearum strain [Bacterium]
Bacteriocin
Structure & Mods
linear peptide [Linear]
canonical L-amino-acid peptide [L]
Lipidation
Warning: this peptide contains non-natural amino acids although they are represented using the closest standard 20 amino acids. Specifically, T1, T8, T17, and T18 are dehydrated into Dhb. P12 is 3,4-dehydrated (Dhp). In total, five residues are dehydrated. Residue K20 is Dab (2,4-diaminobutyric acid). Finally, the acyl chain CH(3)-(CH(2))(6)-CH(OH)-CH(2)-CO is attached to the N-terminus. Thus, the entire sequence is CH(3)-(CH(2))(6)-CH(OH)-CH(2)-CO-Dhb-Pro-Ala-Leu/Ile-Ala-Val-Val-Dhb-Thr-Val-Leu/Ile-Dhp-Ala-Ala-Ala-Val-Dhb-Dhb-Ala-Dab-Ser-Val-OH. Note that residues 4 and 11 can be either L or I
Bio-Activity Profile
Antimicrobial Antifungal
the fungal pathogen S. sclerotiorum that infects plants.
PaperChemical and biological characterization of sclerosin, an antifungal lipopeptide.
RECORD: Rec_0281865 VERIFIED: YES
Provenance & Taxonomy
Pseudomonas sp [Bacterium]; Bacteria [Bacterium]
2; 2
Structure & Mods
linear peptide [Linear]
canonical L-amino-acid peptide [L]
Bio-Activity Profile
Antimicrobial
PMID22940285 Evidence URLhttps://pubmed.ncbi.nlm.nih.gov/22940285/
RECORD: Rec_0293257 VERIFIED: YES
Provenance & Taxonomy
Pseudomonas sp. strain DF41 [Bacterium]
Bacteriocin
Structure & Mods
Single-chain peptide backbone represented as a linear sequence entry [Linear]
canonical L-amino-acid peptide [L]
Bio-Activity Profile
Antimicrobial Antibacterial Antifungal Anti-Gram-positive
Sclerotinia sclerotiorum
PMID22838838 Evidence URLhttps://pubmed.ncbi.nlm.nih.gov/22838838/
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