Peptide Database

Peptide NamePeptide chain L in PDB 5J9Q

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length5 amino acids

Chemical FormulaC18H32N6O9

DescriptionStandard

        SGAKD
    

Molecular Weight476.48 Da

Isoelectric Point (pI)5.81

Net Charge (pH 7.0)-0.54

Net Charge (pH 7.4) -0.75

Charge Density (pH 7.0) -0.1073

GRAVY Index-1.36

Hydrophobic Moment 0.50

Boman Index-0.30

Instability Index-8.98

Aliphatic Index 20.00

Aromaticity 0.0000

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 263.27

LogP -4.42

H-bond Donors 9.0

H-bond Acceptors 9.0

Rotatable Bonds 16.0

Heavy Atoms 33.0

Ring Count 0.0

Amide Bonds 4.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0016292 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5J9Q receptor chain E

MethodProtein-peptide complex structure