Peptide Database

Peptide NameGarvicin B

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length51 amino acids

Chemical FormulaC228H347N65O70

DescriptionStandard

        IGGALGNALAGLGNGLKQWNTTGFSEYNIGGGKVNNGKAPTSIPAYNPYGH
    

Molecular Weight5118.59 Da

Isoelectric Point (pI)9.31

Net Charge (pH 7.0)1.84

Net Charge (pH 7.4) 1.58

Charge Density (pH 7.0) 0.0362

GRAVY Index-0.39

Hydrophobic Moment 0.46

Boman Index0.18

Instability Index20.39

Aliphatic Index 69.02

Aromaticity 0.0980

Extinction Coeff. Reduced 9970.00

Extinction Coeff. Oxidized 9970.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 2158.34

LogP -27.64

H-bond Donors 71.0

H-bond Acceptors 73.0

Rotatable Bonds 162.0

Heavy Atoms 363.0

Ring Count 10.0

Amide Bonds 58.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0265061 VERIFIED: YES

Provenance & Taxonomy

OrganismLactococcus garvieae [Bacterium]

FamilyBacteriocin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial

TargetL. garvieae IBB3403