Peptide Database

Peptide NameRGD

Function Ontology

Integrin Protein

Standard StatusStandard

Sequence Length9 amino acids

Chemical FormulaC44H67N13O16S

DescriptionStandard

        PENYMEARG
    

Molecular Weight1066.15 Da

Isoelectric Point (pI)4.53

Net Charge (pH 7.0)-1.04

Net Charge (pH 7.4) -1.10

Charge Density (pH 7.0) -0.1152

GRAVY Index-1.62

Hydrophobic Moment 0.05

Boman Index-0.30

Instability Index67.59

Aliphatic Index 11.11

Aromaticity 0.1111

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1490.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 481.95

LogP -5.08

H-bond Donors 17.0

H-bond Acceptors 16.0

Rotatable Bonds 34.0

Heavy Atoms 74.0

Ring Count 2.0

Amide Bonds 9.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0002130 VERIFIED: YES

Provenance & Taxonomy

OrganismHomo sapiens [Animal]

Tax ID9606

Structure & Mods

Configlinear peptide [Linear]

Chiralitymixed L/D amino-acid peptide [Mixed]

N-TermAcetylation

C-TermAmidation

Other ModsPen=Penicillamine, Methylation at Tyrosine, Tic=tetrahydroisoquinoline carboxylic acid

Bio-Activity Profile

Function

Integrin Protein

MethodRP-HPLC

Half-LifeRat brain homogenates suspended in aCSF, in vitro; ~72000 s