Peptide Database

Peptide NameViba 16

Function Ontology

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Standard StatusStandard

Sequence Length29 amino acids

Chemical FormulaC126H200N34O41S6

DescriptionStandard

        GLPICGETCTLGTCYTVGCTCSWPVCTRN
    

Molecular Weight3039.53 Da

Isoelectric Point (pI)5.96

Net Charge (pH 7.0)-0.30

Net Charge (pH 7.4) -0.59

Charge Density (pH 7.0) -0.0103

GRAVY Index0.41

Hydrophobic Moment 0.25

Boman Index0.21

Instability Index49.53

Aliphatic Index 60.34

Aromaticity 0.0690

Extinction Coeff. Reduced 6990.00

Extinction Coeff. Oxidized 7365.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1180.46

LogP -15.51

H-bond Donors 48.0

H-bond Acceptors 47.0

Rotatable Bonds 89.0

Heavy Atoms 207.0

Ring Count 5.0

Amide Bonds 29.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0338861 VERIFIED: YES

Provenance & Taxonomy

OrganismViola baoshanensis [Plant]

FamilyCyclotide

Tax ID349688

Structure & Mods

Confighead-to-tail cyclic peptide scaffold [Cyclic]

Chiralitycanonical L-amino-acid peptide [L]

DisulfideCysteine-rich scaffold consistent with multiple disulfide bonds in the annotated family

Bio-Activity Profile

Function

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