Peptide Database

Peptide NamePyocin

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length402 amino acids

Chemical FormulaC1894H2960N524O577S9

DescriptionStandard

        MSGYVPKPARPNASTTSRNSGVEPVDLHALYWAQYPDLADESQTRPTPTGCVFAKSCNLPDGVINHQHPTGFVPVERLADYGMWAVLGTGTAISAQGSPLQWVAGSASGRAVANRLAGSLALTLLEGAGALAASATVGTVALLMPNATAADSAFYTQDQYATLEAGRTRVRVNVKTLPDGSVNAYGFYTGGKADWESVPVIKAKKNGEQYVADIGNGIGLTWTPAVNPQGVLGIPALEGAPPLRTVWVYPPTPQAEAALHNPQHPPEFQDAIIWFPADTGIAPIYVVLSTQLEKNKVAGAAYEEEFHSSFSEQMKASAQQVTFKTERGTRVRVDMIGRTHDGEIVCVECKASETAPLTRNQKRAFPEIEESGAVIVGKGKPGFPGGTVISPTTIKISRPNQN
    

Molecular Weight42591.51 Da

Isoelectric Point (pI)6.19

Net Charge (pH 7.0)-2.88

Net Charge (pH 7.4) -3.60

Charge Density (pH 7.0) -0.0072

GRAVY Index-0.21

Hydrophobic Moment 0.64

Boman Index0.08

Instability Index32.61

Aliphatic Index 77.71

Aromaticity 0.0746

Extinction Coeff. Reduced 56380.00

Extinction Coeff. Oxidized 56630.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0372853 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas marginalis ICMP 9505 [Bacterium]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibiotic Bacteriocin Non-hemolytic Non-ribosomal