Peptide Database

Peptide NameVv-AMP1

Function Ontology

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Standard StatusStandard

Sequence Length27 amino acids

Chemical FormulaC119H196N42O43S4

DescriptionStandard

        RTCESQSHRFKGTCVRQSDCAAVCQTE
    

Molecular Weight3031.35 Da

Isoelectric Point (pI)7.90

Net Charge (pH 7.0)0.82

Net Charge (pH 7.4) 0.50

Charge Density (pH 7.0) 0.0303

GRAVY Index-0.80

Hydrophobic Moment 0.45

Boman Index-0.33

Instability Index53.27

Aliphatic Index 28.89

Aromaticity 0.0370

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 250.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1422.87

LogP -22.05

H-bond Donors 55.0

H-bond Acceptors 49.0

Rotatable Bonds 102.0

Heavy Atoms 208.0

Ring Count 2.0

Amide Bonds 29.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0048062 VERIFIED: YES

Provenance & Taxonomy

OrganismVitis vinifera [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)