Peptide Database

Peptide NameSakacin G

Function Ontology

—

Standard StatusStandard

Sequence Length31 amino acids

Chemical FormulaC136H212N40O45S2

DescriptionStandard

        YYGNGVSCNKKGCSVDWGKAISIIGNNSAAN
    

Molecular Weight3191.51 Da

Isoelectric Point (pI)8.79

Net Charge (pH 7.0)1.74

Net Charge (pH 7.4) 1.50

Charge Density (pH 7.0) 0.0560

GRAVY Index-0.29

Hydrophobic Moment 0.49

Boman Index0.08

Instability Index5.08

Aliphatic Index 66.13

Aromaticity 0.0968

Extinction Coeff. Reduced 8480.00

Extinction Coeff. Oxidized 8605.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1404.30

LogP -19.70

H-bond Donors 50.0

H-bond Acceptors 49.0

Rotatable Bonds 105.0

Heavy Atoms 223.0

Ring Count 4.0

Amide Bonds 35.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0066014 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)