Peptide Database

Peptide NameSD2

Function Ontology

—

Standard StatusStandard

Sequence Length34 amino acids

Chemical FormulaC149H246N50O51S5

DescriptionStandard

        GPMVAEARTCESQSHRFKGTCVRQSNCVAVCQTE
    

Molecular Weight3714.18 Da

Isoelectric Point (pI)7.90

Net Charge (pH 7.0)0.82

Net Charge (pH 7.4) 0.50

Charge Density (pH 7.0) 0.0241

GRAVY Index-0.44

Hydrophobic Moment 0.50

Boman Index-0.16

Instability Index39.08

Aliphatic Index 42.94

Aromaticity 0.0294

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 250.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1660.87

LogP -24.17

H-bond Donors 62.0

H-bond Acceptors 58.0

Rotatable Bonds 123.0

Heavy Atoms 255.0

Ring Count 3.0

Amide Bonds 37.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0323695 VERIFIED: YES

Provenance & Taxonomy

OrganismVitis vinifera [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)