Peptide Database

Peptide NamePeptide chain B in PDB 2VDA

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length28 amino acids

Chemical FormulaC129H234N40O32S4

DescriptionStandard

        MMITLRKRRKLPLAVAVAAGVMSAQAMA
    

Molecular Weight2985.75 Da

Isoelectric Point (pI)12.00

Net Charge (pH 7.0)4.50

Net Charge (pH 7.4) 4.28

Charge Density (pH 7.0) 0.1607

GRAVY Index0.73

Hydrophobic Moment 0.32

Boman Index0.13

Instability Index71.54

Aliphatic Index 111.79

Aromaticity 0.0000

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1161.52

LogP -9.38

H-bond Donors 42.0

H-bond Acceptors 41.0

Rotatable Bonds 102.0

Heavy Atoms 205.0

Ring Count 1.0

Amide Bonds 28.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0034713 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 2VDA receptor chain A

MethodProtein-peptide complex structure