Peptide Database

Peptide NameS-type Pyocin domain-containing protein

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Anti-Gram-negative

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length571 amino acids

Chemical FormulaC2753H4322N760O830S23

DescriptionStandard

        MPGAARLNDIGSGHDCFPETPIIEGSSDVIINGQPAARQGDAVLLHGCPCPNTPHGVHSRKIAEGSSTVIINGKNAARIGDGINCGGVIVSGSGNVIIGDTPHRSPVQDCAKQAALTRAPLLALTPMLAVEPVFAKSCLRGAGCTDAGKEEEPQGNIGEMSFYVAEPVKQANPSQEKSVEVKQYAQAAKKKNTSSAVSPPQSFTGKTEPLSKTPPGAINKPQIPPMEPWYKTVFDLLVGKADAAMLPPPQQVVMAGTAAQAGAIAAAGGAVAQANQDAAKALTHQMKRLSGPSIWQGQLQMAQSFLLMGALIQHHLKGEKADLLTPEKLLEAANKQGTVPSRVRYQWMEDEETGRLKAVGYHTSMESGRDQVRVRLLKHDFPNNRYEFWEEGATGPTILWTPDNPGIELPTDTAHGEQPVIPSAIPGLEIPEMDDVSILATPMPDEKDFRDYILVFPENAFPPIYVYLSKKIDTPIWTKTEDLTPVSNAYTHWIKHRKEFSEKNYNNSKEYVNDTHDFVNNPPAGVLIKKRGNGDTLYYHPESNTFAVMNKHGVPKTMFKPKNKMLYWEKQ
    

Molecular Weight62083.86 Da

Isoelectric Point (pI)6.48

Net Charge (pH 7.0)-3.10

Net Charge (pH 7.4) -4.39

Charge Density (pH 7.0) -0.0054

GRAVY Index-0.45

Hydrophobic Moment 0.68

Boman Index0.01

Instability Index41.20

Aliphatic Index 73.85

Aromaticity 0.0665

Extinction Coeff. Reduced 66350.00

Extinction Coeff. Oxidized 66725.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0073333 VERIFIED: YES

Provenance & Taxonomy

OrganismPectobacterium wasabiae CFBP 3304 [Bacterium]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Anti-Gram-negative Antibiotic Bacteriocin Non-hemolytic Non-ribosomal

TargetEscherichia coli (Gram-negative)