Peptide Database

Peptide NamePeptide chain F in PDB 5T78

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length7 amino acids

Chemical FormulaC32H52N10O11

DescriptionStandard

        PDTRPAP
    

Molecular Weight752.82 Da

Isoelectric Point (pI)6.27

Net Charge (pH 7.0)-0.04

Net Charge (pH 7.4) -0.10

Charge Density (pH 7.0) -0.0058

GRAVY Index-1.67

Hydrophobic Moment 0.31

Boman Index-0.36

Instability Index58.87

Aliphatic Index 14.29

Aromaticity 0.0000

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 325.78

LogP -4.12

H-bond Donors 11.0

H-bond Acceptors 11.0

Rotatable Bonds 18.0

Heavy Atoms 53.0

Ring Count 3.0

Amide Bonds 6.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0425771 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5T78 receptor chain A

MethodProtein-peptide complex structure